Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.89□□□□□ -0.19
Hdac3O88895 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.89□□□□□ -0.19
Hdac3O88895 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Hdac3O88895 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hdac3O88895 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hdac3O88895 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hdac3O88895 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hdac3O88895 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.88□□□□□ -0.19
Hdac3O88895 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Hdac3O88895 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.88□□□□□ -0.19
Hdac3O88895 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.88□□□□□ -0.19
Hdac3O88895 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Hdac3O88895 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Hdac3O88895 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hdac3O88895 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hdac3O88895 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.88□□□□□ -0.19
Hdac3O88895 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.88□□□□□ -0.19
Hdac3O88895 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.88□□□□□ -0.19
Hdac3O88895 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hdac3O88895 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Hdac3O88895 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.87□□□□□ -0.19
Hdac3O88895 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hdac3O88895 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hdac3O88895 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.87□□□□□ -0.19
Hdac3O88895 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Hdac3O88895 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.87□□□□□ -0.19
Hdac3O88895 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.87□□□□□ -0.19
Hdac3O88895 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.87□□□□□ -0.19
Hdac3O88895 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.87□□□□□ -0.19
Hdac3O88895 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.87□□□□□ -0.19
Hdac3O88895 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.87□□□□□ -0.19
Hdac3O88895 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hdac3O88895 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hdac3O88895 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Hdac3O88895 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.86□□□□□ -0.19
Hdac3O88895 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.86□□□□□ -0.19
Hdac3O88895 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hdac3O88895 Olfr129-201ENSMUST00000122318 993 ntBASIC13.86□□□□□ -0.19
Hdac3O88895 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.86□□□□□ -0.19
Hdac3O88895 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.86□□□□□ -0.19
Hdac3O88895 Mir3081-201ENSMUST00000175305 84 ntBASIC13.86□□□□□ -0.19
Hdac3O88895 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms