Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.83□□□□□ -0.2
CcnkO88874 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CcnkO88874 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CcnkO88874 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
CcnkO88874 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.83□□□□□ -0.2
CcnkO88874 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.83□□□□□ -0.2
CcnkO88874 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.83□□□□□ -0.2
CcnkO88874 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CcnkO88874 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CcnkO88874 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CcnkO88874 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CcnkO88874 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CcnkO88874 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.82□□□□□ -0.2
CcnkO88874 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.82□□□□□ -0.2
CcnkO88874 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.82□□□□□ -0.2
CcnkO88874 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CcnkO88874 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CcnkO88874 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CcnkO88874 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
CcnkO88874 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.81□□□□□ -0.2
CcnkO88874 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.81□□□□□ -0.2
CcnkO88874 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CcnkO88874 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CcnkO88874 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CcnkO88874 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CcnkO88874 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CcnkO88874 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CcnkO88874 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CcnkO88874 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CcnkO88874 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CcnkO88874 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CcnkO88874 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CcnkO88874 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CcnkO88874 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms