Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sema3fO88632 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.82■□□□□ 0.44
Sema3fO88632 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sema3fO88632 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sema3fO88632 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Sema3fO88632 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Sema3fO88632 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.81■□□□□ 0.44
Sema3fO88632 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sema3fO88632 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sema3fO88632 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Sema3fO88632 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Sema3fO88632 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sema3fO88632 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sema3fO88632 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.8■□□□□ 0.44
Sema3fO88632 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sema3fO88632 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sema3fO88632 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.8■□□□□ 0.44
Sema3fO88632 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.8■□□□□ 0.44
Sema3fO88632 Gm26308-201ENSMUST00000157768 69 ntBASIC17.8■□□□□ 0.44
Sema3fO88632 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.8■□□□□ 0.44
Sema3fO88632 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.8■□□□□ 0.44
Sema3fO88632 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sema3fO88632 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.8■□□□□ 0.44
Sema3fO88632 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.8■□□□□ 0.44
Sema3fO88632 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Sema3fO88632 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.79■□□□□ 0.44
Sema3fO88632 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.79■□□□□ 0.44
Sema3fO88632 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.79■□□□□ 0.44
Sema3fO88632 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sema3fO88632 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Sema3fO88632 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sema3fO88632 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Gm14722-201ENSMUST00000118943 689 ntBASIC17.79■□□□□ 0.44
Sema3fO88632 Gm17271-201ENSMUST00000165535 355 ntBASIC17.79■□□□□ 0.44
Sema3fO88632 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.79■□□□□ 0.44
Sema3fO88632 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sema3fO88632 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sema3fO88632 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sema3fO88632 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sema3fO88632 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms