Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Cops3O88543 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Gm9987-201ENSMUST00000069768 567 ntBASIC13.9□□□□□ -0.18
Cops3O88543 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cops3O88543 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cops3O88543 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Cops3O88543 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cops3O88543 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Cops3O88543 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cops3O88543 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cops3O88543 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.89□□□□□ -0.19
Cops3O88543 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.89□□□□□ -0.19
Cops3O88543 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cops3O88543 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cops3O88543 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cops3O88543 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cops3O88543 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cops3O88543 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cops3O88543 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.88□□□□□ -0.19
Cops3O88543 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cops3O88543 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cops3O88543 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.88□□□□□ -0.19
Cops3O88543 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cops3O88543 Mir6982-201ENSMUST00000184354 68 ntBASIC13.88□□□□□ -0.19
Cops3O88543 Gm10252-201ENSMUST00000209541 832 ntBASIC13.88□□□□□ -0.19
Cops3O88543 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cops3O88543 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.88□□□□□ -0.19
Cops3O88543 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cops3O88543 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.88□□□□□ -0.19
Cops3O88543 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops3O88543 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.87□□□□□ -0.19
Cops3O88543 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.87□□□□□ -0.19
Cops3O88543 Gm6623-201ENSMUST00000173570 544 ntBASIC13.87□□□□□ -0.19
Cops3O88543 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cops3O88543 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.87□□□□□ -0.19
Cops3O88543 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cops3O88543 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cops3O88543 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Cops3O88543 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.87□□□□□ -0.19
Cops3O88543 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops3O88543 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms