Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.28■□□□□ 0.04
Pdlim1O70400 Mir5131-201ENSMUST00000175426 93 ntBASIC15.28■□□□□ 0.04
Pdlim1O70400 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.28■□□□□ 0.04
Pdlim1O70400 Gm8318-201ENSMUST00000182954 872 ntBASIC15.28■□□□□ 0.04
Pdlim1O70400 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.28■□□□□ 0.04
Pdlim1O70400 Gm2651-201ENSMUST00000203560 838 ntBASIC15.28■□□□□ 0.04
Pdlim1O70400 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.28■□□□□ 0.04
Pdlim1O70400 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pdlim1O70400 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.28■□□□□ 0.04
Pdlim1O70400 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pdlim1O70400 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pdlim1O70400 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim1O70400 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.28■□□□□ 0.04
Pdlim1O70400 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.27■□□□□ 0.04
Pdlim1O70400 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.27■□□□□ 0.04
Pdlim1O70400 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.27■□□□□ 0.04
Pdlim1O70400 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.27■□□□□ 0.04
Pdlim1O70400 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Pdlim1O70400 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pdlim1O70400 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pdlim1O70400 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.27■□□□□ 0.04
Pdlim1O70400 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.27■□□□□ 0.04
Pdlim1O70400 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.27■□□□□ 0.04
Pdlim1O70400 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.27■□□□□ 0.04
Pdlim1O70400 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim1O70400 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pdlim1O70400 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.27■□□□□ 0.03
Pdlim1O70400 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim1O70400 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pdlim1O70400 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim1O70400 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim1O70400 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim1O70400 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim1O70400 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim1O70400 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim1O70400 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim1O70400 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Gm13036-201ENSMUST00000117799 748 ntBASIC15.26■□□□□ 0.03
Pdlim1O70400 Gm12350-201ENSMUST00000121208 462 ntBASIC15.26■□□□□ 0.03
Pdlim1O70400 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.26■□□□□ 0.03
Pdlim1O70400 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.26■□□□□ 0.03
Pdlim1O70400 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim1O70400 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim1O70400 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim1O70400 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.25■□□□□ 0.03
Pdlim1O70400 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pdlim1O70400 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdlim1O70400 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim1O70400 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdlim1O70400 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.25■□□□□ 0.03
Pdlim1O70400 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim1O70400 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdlim1O70400 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.25■□□□□ 0.03
Pdlim1O70400 Gm9682-201ENSMUST00000197505 556 ntBASIC15.25■□□□□ 0.03
Pdlim1O70400 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Gm7787-201ENSMUST00000216858 688 ntBASIC15.25■□□□□ 0.03
Pdlim1O70400 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.25■□□□□ 0.03
Pdlim1O70400 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim1O70400 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms