Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.38□□□□□ -0.11
BckdkO55028 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.38□□□□□ -0.11
BckdkO55028 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
BckdkO55028 Gm2651-201ENSMUST00000203560 838 ntBASIC14.38□□□□□ -0.11
BckdkO55028 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
BckdkO55028 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
BckdkO55028 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
BckdkO55028 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BckdkO55028 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BckdkO55028 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
BckdkO55028 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
BckdkO55028 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.37□□□□□ -0.11
BckdkO55028 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BckdkO55028 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.37□□□□□ -0.11
BckdkO55028 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
BckdkO55028 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BckdkO55028 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
BckdkO55028 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BckdkO55028 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Gm44357-201ENSMUST00000195897 142 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm19658-201ENSMUST00000196231 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44367-201ENSMUST00000196836 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44350-201ENSMUST00000197197 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44390-201ENSMUST00000197533 144 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44313-201ENSMUST00000198018 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44486-201ENSMUST00000198508 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44314-201ENSMUST00000199263 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44394-201ENSMUST00000199558 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44484-201ENSMUST00000199873 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44466-201ENSMUST00000200264 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm44359-201ENSMUST00000200671 138 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.36□□□□□ -0.11
BckdkO55028 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.36□□□□□ -0.11
BckdkO55028 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BckdkO55028 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.36□□□□□ -0.11
BckdkO55028 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BckdkO55028 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.36□□□□□ -0.11
BckdkO55028 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BckdkO55028 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms