Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Rprl3-201ENSMUST00000157400 290 ntBASIC18.44■□□□□ 0.54
Smarce1O54941 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.44■□□□□ 0.54
Smarce1O54941 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Smarce1O54941 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Gm9172-201ENSMUST00000212092 954 ntBASIC18.44■□□□□ 0.54
Smarce1O54941 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.44■□□□□ 0.54
Smarce1O54941 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.44■□□□□ 0.54
Smarce1O54941 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smarce1O54941 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smarce1O54941 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.43■□□□□ 0.54
Smarce1O54941 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm8825-201ENSMUST00000182565 998 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm4518-201ENSMUST00000182638 718 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm29518-201ENSMUST00000190858 372 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Smarce1O54941 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.43■□□□□ 0.54
Smarce1O54941 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Smarce1O54941 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarce1O54941 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smarce1O54941 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smarce1O54941 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smarce1O54941 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Smarce1O54941 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smarce1O54941 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smarce1O54941 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smarce1O54941 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarce1O54941 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smarce1O54941 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.41■□□□□ 0.54
Smarce1O54941 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smarce1O54941 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smarce1O54941 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smarce1O54941 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smarce1O54941 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smarce1O54941 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarce1O54941 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Smarce1O54941 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.4■□□□□ 0.54
Smarce1O54941 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarce1O54941 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarce1O54941 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms