Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.8□□□□□ -0.2
Dkk1O54908 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.8□□□□□ -0.2
Dkk1O54908 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.8□□□□□ -0.2
Dkk1O54908 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dkk1O54908 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dkk1O54908 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dkk1O54908 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dkk1O54908 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Gm15161-201ENSMUST00000117340 387 ntBASIC13.79□□□□□ -0.2
Dkk1O54908 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC13.79□□□□□ -0.2
Dkk1O54908 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.79□□□□□ -0.2
Dkk1O54908 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.79□□□□□ -0.2
Dkk1O54908 Gm25025-201ENSMUST00000175018 111 ntBASIC13.79□□□□□ -0.2
Dkk1O54908 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Dkk1O54908 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.79□□□□□ -0.2
Dkk1O54908 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.79□□□□□ -0.2
Dkk1O54908 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.79□□□□□ -0.2
Dkk1O54908 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC13.79□□□□□ -0.2
Dkk1O54908 Gm8607-201ENSMUST00000221864 431 ntBASIC13.79□□□□□ -0.2
Dkk1O54908 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Dkk1O54908 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Dkk1O54908 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.79□□□□□ -0.2
Dkk1O54908 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dkk1O54908 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.78□□□□□ -0.2
Dkk1O54908 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Dkk1O54908 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Dkk1O54908 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.78□□□□□ -0.2
Dkk1O54908 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Dkk1O54908 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC13.78□□□□□ -0.2
Dkk1O54908 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.78□□□□□ -0.2
Dkk1O54908 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.78□□□□□ -0.2
Dkk1O54908 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC13.78□□□□□ -0.2
Dkk1O54908 Gm43491-201ENSMUST00000197133 784 ntBASIC13.78□□□□□ -0.2
Dkk1O54908 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC13.78□□□□□ -0.2
Dkk1O54908 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.78□□□□□ -0.2
Dkk1O54908 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Dkk1O54908 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Dkk1O54908 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Dkk1O54908 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Dkk1O54908 Cenpk-202ENSMUST00000070761 1306 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Gm18300-201ENSMUST00000192792 1406 ntBASIC13.78□□□□□ -0.2
Dkk1O54908 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC13.78□□□□□ -0.2
Dkk1O54908 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.78□□□□□ -0.2
Dkk1O54908 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dkk1O54908 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Dkk1O54908 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Dkk1O54908 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.77□□□□□ -0.2
Dkk1O54908 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dkk1O54908 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Dkk1O54908 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms