Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nr1i3O35627 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nr1i3O35627 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.65■□□□□ 0.26
Nr1i3O35627 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.65■□□□□ 0.26
Nr1i3O35627 Gm27357-201ENSMUST00000183754 135 ntBASIC16.65■□□□□ 0.26
Nr1i3O35627 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.65■□□□□ 0.26
Nr1i3O35627 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Nr1i3O35627 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Nr1i3O35627 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nr1i3O35627 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1i3O35627 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.64■□□□□ 0.26
Nr1i3O35627 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nr1i3O35627 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Nr1i3O35627 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Mir7071-201ENSMUST00000184847 69 ntBASIC16.64■□□□□ 0.25
Nr1i3O35627 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nr1i3O35627 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nr1i3O35627 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nr1i3O35627 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1i3O35627 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nr1i3O35627 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Nr1i3O35627 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.63■□□□□ 0.25
Nr1i3O35627 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Gm8655-201ENSMUST00000221159 852 ntBASIC16.63■□□□□ 0.25
Nr1i3O35627 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Nr1i3O35627 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1i3O35627 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nr1i3O35627 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.62■□□□□ 0.25
Nr1i3O35627 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.62■□□□□ 0.25
Nr1i3O35627 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nr1i3O35627 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1i3O35627 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1i3O35627 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1i3O35627 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1i3O35627 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1i3O35627 Gm27867-201ENSMUST00000184778 125 ntBASIC16.62■□□□□ 0.25
Nr1i3O35627 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.62■□□□□ 0.25
Nr1i3O35627 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.62■□□□□ 0.25
Nr1i3O35627 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1i3O35627 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1i3O35627 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1i3O35627 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms