Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk3O35492 BC037039-201ENSMUST00000192003 2205 ntBASIC14.78□□□□□ -0.04
Clk3O35492 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk3O35492 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clk3O35492 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk3O35492 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Clk3O35492 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk3O35492 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk3O35492 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk3O35492 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clk3O35492 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clk3O35492 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clk3O35492 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.77□□□□□ -0.04
Clk3O35492 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clk3O35492 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Clk3O35492 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Clk3O35492 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clk3O35492 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clk3O35492 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Clk3O35492 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.77□□□□□ -0.04
Clk3O35492 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clk3O35492 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Clk3O35492 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Clk3O35492 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Clk3O35492 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Clk3O35492 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.77□□□□□ -0.05
Clk3O35492 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Clk3O35492 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.77□□□□□ -0.05
Clk3O35492 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.77□□□□□ -0.05
Clk3O35492 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clk3O35492 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Clk3O35492 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Clk3O35492 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Gm15794-201ENSMUST00000120182 631 ntBASIC14.76□□□□□ -0.05
Clk3O35492 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Rprl3-201ENSMUST00000157400 290 ntBASIC14.76□□□□□ -0.05
Clk3O35492 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.76□□□□□ -0.05
Clk3O35492 Gm21362-201ENSMUST00000194272 928 ntBASIC14.76□□□□□ -0.05
Clk3O35492 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.76□□□□□ -0.05
Clk3O35492 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.76□□□□□ -0.05
Clk3O35492 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Clk3O35492 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Clk3O35492 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clk3O35492 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Clk3O35492 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.75□□□□□ -0.05
Clk3O35492 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Clk3O35492 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.75□□□□□ -0.05
Clk3O35492 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.75□□□□□ -0.05
Clk3O35492 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Clk3O35492 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Clk3O35492 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.75□□□□□ -0.05
Clk3O35492 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Clk3O35492 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.75□□□□□ -0.05
Clk3O35492 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clk3O35492 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clk3O35492 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Clk3O35492 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms