Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn6O35454 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 Gm7171-201ENSMUST00000177413 1349 ntBASIC16.78■□□□□ 0.28
Clcn6O35454 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC16.78■□□□□ 0.28
Clcn6O35454 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC16.78■□□□□ 0.28
Clcn6O35454 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.78■□□□□ 0.28
Clcn6O35454 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.78■□□□□ 0.28
Clcn6O35454 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.78■□□□□ 0.28
Clcn6O35454 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC16.78■□□□□ 0.28
Clcn6O35454 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clcn6O35454 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC16.78■□□□□ 0.28
Clcn6O35454 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Clcn6O35454 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Clcn6O35454 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn6O35454 Gm10419-201ENSMUST00000100944 1671 ntTSL 2 BASIC16.78■□□□□ 0.28
Clcn6O35454 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.77■□□□□ 0.28
Clcn6O35454 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.77■□□□□ 0.28
Clcn6O35454 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Clcn6O35454 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Gm7889-201ENSMUST00000185591 958 ntBASIC16.77■□□□□ 0.28
Clcn6O35454 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Clcn6O35454 Gm7370-201ENSMUST00000219471 767 ntBASIC16.77■□□□□ 0.28
Clcn6O35454 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Clcn6O35454 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Clcn6O35454 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn6O35454 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn6O35454 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn6O35454 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn6O35454 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn6O35454 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn6O35454 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn6O35454 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn6O35454 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Clcn6O35454 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Clcn6O35454 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Clcn6O35454 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Clcn6O35454 Gm11622-201ENSMUST00000120525 691 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.76■□□□□ 0.27
Clcn6O35454 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Clcn6O35454 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC16.76■□□□□ 0.27
Clcn6O35454 Gm28648-201ENSMUST00000190092 343 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Gm19572-201ENSMUST00000214326 338 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC16.76■□□□□ 0.27
Clcn6O35454 CT009754.4-201ENSMUST00000221430 565 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Clcn6O35454 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 App-207ENSMUST00000227737 2827 ntBASIC16.76■□□□□ 0.27
Clcn6O35454 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn6O35454 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Clcn6O35454 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn6O35454 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms