Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Polr1aO35134 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Polr1aO35134 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Polr1aO35134 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Polr1aO35134 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Polr1aO35134 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC23.53■■□□□ 1.36
Polr1aO35134 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Gm3365-201ENSMUST00000216296 1480 ntBASIC23.52■■□□□ 1.36
Polr1aO35134 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC23.52■■□□□ 1.36
Polr1aO35134 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
Polr1aO35134 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Polr1aO35134 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Polr1aO35134 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
Polr1aO35134 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC23.52■■□□□ 1.36
Polr1aO35134 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Polr1aO35134 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Polr1aO35134 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
Polr1aO35134 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
Polr1aO35134 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Polr1aO35134 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Polr1aO35134 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC23.51■■□□□ 1.35
Polr1aO35134 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC23.51■■□□□ 1.35
Polr1aO35134 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC23.51■■□□□ 1.35
Polr1aO35134 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Celf4-206ENSMUST00000224553 1729 ntBASIC23.51■■□□□ 1.35
Polr1aO35134 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Polr1aO35134 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Gm27989-201ENSMUST00000184721 107 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Polr1aO35134 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC23.5■■□□□ 1.35
Polr1aO35134 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Polr1aO35134 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Gm5479-201ENSMUST00000160578 435 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC23.5■■□□□ 1.35
Polr1aO35134 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Polr1aO35134 Gm4691-201ENSMUST00000182339 1000 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm29310-201ENSMUST00000185468 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21825-201ENSMUST00000185728 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm29109-201ENSMUST00000185895 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21896-201ENSMUST00000186520 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21873-201ENSMUST00000186728 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21794-201ENSMUST00000187056 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21880-201ENSMUST00000187275 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21826-201ENSMUST00000187451 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21198-201ENSMUST00000188393 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21749-201ENSMUST00000189343 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21901-201ENSMUST00000189568 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm29424-201ENSMUST00000189716 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm28599-201ENSMUST00000189838 694 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21867-201ENSMUST00000189917 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm29269-201ENSMUST00000190087 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21722-201ENSMUST00000190153 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm28423-201ENSMUST00000190701 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21899-201ENSMUST00000190745 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21910-201ENSMUST00000191163 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21849-201ENSMUST00000191571 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm28678-201ENSMUST00000191593 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Gm20910-201ENSMUST00000193268 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm21871-201ENSMUST00000194621 696 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm2451-201ENSMUST00000199447 999 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm10290-201ENSMUST00000200451 999 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 Gm44855-201ENSMUST00000205725 362 ntBASIC23.5■■□□□ 1.35
Polr1aO35134 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC23.5■■□□□ 1.35
Polr1aO35134 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Polr1aO35134 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Polr1aO35134 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Polr1aO35134 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Polr1aO35134 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Polr1aO35134 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Polr1aO35134 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Polr1aO35134 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms