Protein–RNA interactions for Protein: J3QMM8

Gm7971, Predicted gene 16429, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm7971J3QMM8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.09■□□□□ 0.01
Gm7971J3QMM8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm7971J3QMM8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Gm7971J3QMM8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm7971J3QMM8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Gm7971J3QMM8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Gm7971J3QMM8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.08■□□□□ 0
Gm7971J3QMM8 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.08■□□□□ 0
Gm7971J3QMM8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.08■□□□□ 0
Gm7971J3QMM8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Gm6623-201ENSMUST00000173570 544 ntBASIC15.08■□□□□ 0
Gm7971J3QMM8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.08■□□□□ 0
Gm7971J3QMM8 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.08■□□□□ 0
Gm7971J3QMM8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Gm7971J3QMM8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Gm7971J3QMM8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Gm7971J3QMM8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Gm7971J3QMM8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm7971J3QMM8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Gm7971J3QMM8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Gm7971J3QMM8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.07■□□□□ 0
Gm7971J3QMM8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.07■□□□□ 0
Gm7971J3QMM8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Gm7971J3QMM8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Gm7971J3QMM8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Gm7971J3QMM8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm7971J3QMM8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.06■□□□□ 0
Gm7971J3QMM8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Gm7971J3QMM8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Gm7971J3QMM8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.06■□□□□ 0
Gm7971J3QMM8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.06■□□□□ 0
Gm7971J3QMM8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Gm7971J3QMM8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Gm7971J3QMM8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.06■□□□□ 0
Gm7971J3QMM8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Gm7971J3QMM8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm7971J3QMM8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms