Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Gm12601-201ENSMUST00000118994 846 ntBASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Gm25144-201ENSMUST00000179561 110 ntBASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Gm25352-201ENSMUST00000179815 110 ntBASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Gm19189-201ENSMUST00000221689 754 ntBASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx1-1G3UXB3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Gm14767-201ENSMUST00000121559 586 ntBASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Gm9824-201ENSMUST00000178707 561 ntBASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Gm44286-201ENSMUST00000204098 1487 ntBASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx1-1G3UXB3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Gm8502-201ENSMUST00000185708 901 ntBASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Gm8510-201ENSMUST00000189202 895 ntBASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Gm2316-201ENSMUST00000190613 921 ntBASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Gm37517-201ENSMUST00000194004 1289 ntBASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Gm17838-201ENSMUST00000205872 876 ntBASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Nkx1-1G3UXB3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 AC154843.1-201ENSMUST00000226897 1138 ntBASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-1G3UXB3 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Mir1192-201ENSMUST00000116976 121 ntBASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Gm29664-201ENSMUST00000191125 463 ntBASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-1G3UXB3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms