Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Gm9385-201ENSMUST00000117563 472 ntBASIC18.57■□□□□ 0.56
NpcdF8VQB8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.57■□□□□ 0.56
NpcdF8VQB8 Gm2272-201ENSMUST00000194903 582 ntBASIC18.57■□□□□ 0.56
NpcdF8VQB8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.57■□□□□ 0.56
NpcdF8VQB8 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.57■□□□□ 0.56
NpcdF8VQB8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NpcdF8VQB8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NpcdF8VQB8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Gm7488-201ENSMUST00000117148 684 ntBASIC18.56■□□□□ 0.56
NpcdF8VQB8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Gm7653-201ENSMUST00000214567 508 ntBASIC18.56■□□□□ 0.56
NpcdF8VQB8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NpcdF8VQB8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NpcdF8VQB8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.54■□□□□ 0.56
NpcdF8VQB8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Gm13453-201ENSMUST00000118708 357 ntBASIC18.54■□□□□ 0.56
NpcdF8VQB8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms