Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc85cE9Q6B2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc85cE9Q6B2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.99■□□□□ 0.63
Ccdc85cE9Q6B2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc85cE9Q6B2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc85cE9Q6B2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc85cE9Q6B2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc85cE9Q6B2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc85cE9Q6B2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Gm27920-201ENSMUST00000183953 96 ntBASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Iqck-206ENSMUST00000208658 2891 ntBASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc85cE9Q6B2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Gm12742-201ENSMUST00000117326 410 ntBASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc85cE9Q6B2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Gm24543-201ENSMUST00000103867 82 ntBASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc85cE9Q6B2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Gm4875-201ENSMUST00000118257 786 ntBASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Gm45841-201ENSMUST00000207700 164 ntBASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc85cE9Q6B2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc85cE9Q6B2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms