Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm28043E0CXC2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Gm33142-201ENSMUST00000193913 867 ntBASIC15.57■□□□□ 0.08
Gm28043E0CXC2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.57■□□□□ 0.08
Gm28043E0CXC2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm28043E0CXC2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm28043E0CXC2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Gm15794-201ENSMUST00000120182 631 ntBASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm28043E0CXC2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms