Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim30cD3YVI9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim30cD3YVI9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim30cD3YVI9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim30cD3YVI9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim30cD3YVI9 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.96■□□□□ 0.3
Trim30cD3YVI9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim30cD3YVI9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Trim30cD3YVI9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim30cD3YVI9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim30cD3YVI9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim30cD3YVI9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim30cD3YVI9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms