Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp42B2RQC2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp42B2RQC2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp42B2RQC2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp42B2RQC2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp42B2RQC2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp42B2RQC2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Usp42B2RQC2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.08■□□□□ 0.49
Usp42B2RQC2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.08■□□□□ 0.49
Usp42B2RQC2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.08■□□□□ 0.49
Usp42B2RQC2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.08■□□□□ 0.49
Usp42B2RQC2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Usp42B2RQC2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp42B2RQC2 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.08■□□□□ 0.49
Usp42B2RQC2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp42B2RQC2 Gm15590-201ENSMUST00000078419 552 ntBASIC18.08■□□□□ 0.49
Usp42B2RQC2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Usp42B2RQC2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp42B2RQC2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.08■□□□□ 0.48
Usp42B2RQC2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp42B2RQC2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp42B2RQC2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp42B2RQC2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp42B2RQC2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.07■□□□□ 0.48
Usp42B2RQC2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.07■□□□□ 0.48
Usp42B2RQC2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.07■□□□□ 0.48
Usp42B2RQC2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.07■□□□□ 0.48
Usp42B2RQC2 Gm45167-201ENSMUST00000208007 322 ntBASIC18.07■□□□□ 0.48
Usp42B2RQC2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp42B2RQC2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.06■□□□□ 0.48
Usp42B2RQC2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.06■□□□□ 0.48
Usp42B2RQC2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.06■□□□□ 0.48
Usp42B2RQC2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp42B2RQC2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp42B2RQC2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp42B2RQC2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp42B2RQC2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp42B2RQC2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp42B2RQC2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Usp42B2RQC2 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.05■□□□□ 0.48
Usp42B2RQC2 Gm4899-201ENSMUST00000178708 719 ntBASIC18.05■□□□□ 0.48
Usp42B2RQC2 Gm27628-201ENSMUST00000184911 107 ntBASIC18.05■□□□□ 0.48
Usp42B2RQC2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp42B2RQC2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.05■□□□□ 0.48
Usp42B2RQC2 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.05■□□□□ 0.48
Usp42B2RQC2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp42B2RQC2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp42B2RQC2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp42B2RQC2 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms