Protein–RNA interactions for Protein: A0A1D5RMN0

Tnip3, TNFAIP3-interacting protein 3, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnip3A0A1D5RMN0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnip3A0A1D5RMN0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnip3A0A1D5RMN0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnip3A0A1D5RMN0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.42■□□□□ 0.06
Tnip3A0A1D5RMN0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Gm13836-201ENSMUST00000121159 501 ntBASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnip3A0A1D5RMN0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnip3A0A1D5RMN0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 BC037039-201ENSMUST00000192003 2205 ntBASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnip3A0A1D5RMN0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tnip3A0A1D5RMN0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms