Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm15794-201ENSMUST00000120182 631 ntBASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhgb8A0A140LI48 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Gm17971-201ENSMUST00000190239 806 ntBASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhgb8A0A140LI48 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhgb8A0A140LI48 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm18421-201ENSMUST00000204122 625 ntBASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhgb8A0A140LI48 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms