Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Rps4l-201ENSMUST00000071745 943 ntBASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm10355-201ENSMUST00000097146 517 ntBASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv30A0A0B4J1P1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Mir8098-201ENSMUST00000184011 137 ntBASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm6376-201ENSMUST00000209407 580 ntBASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Sybu-209ENSMUST00000228639 4113 ntBASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trbv30A0A0B4J1P1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trbv30A0A0B4J1P1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms