Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Gm6376-201ENSMUST00000209407 580 ntBASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Rps4l-201ENSMUST00000071745 943 ntBASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6-4A0A075B6B4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-4A0A075B6B4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Gm28659-201ENSMUST00000188013 759 ntBASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav6-4A0A075B6B4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Mir8098-201ENSMUST00000184011 137 ntBASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms