Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm44450-201ENSMUST00000199528 114 ntBASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12□□□□□ -0.49
Trav6d-7A0A075B6B0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-7A0A075B6B0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm15794-201ENSMUST00000120182 631 ntBASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Olfr129-201ENSMUST00000122318 993 ntBASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm10052-201ENSMUST00000168019 960 ntBASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Gm7729-201ENSMUST00000050143 801 ntBASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-7A0A075B6B0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms