Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav7-6A0A075B640 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm11355-201ENSMUST00000121120 306 ntBASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm22697-201ENSMUST00000175194 63 ntBASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm18101-201ENSMUST00000215769 548 ntBASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm21559-201ENSMUST00000220638 855 ntBASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm8587-201ENSMUST00000076538 843 ntBASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav7-6A0A075B640 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7-6A0A075B640 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7-6A0A075B640 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7-6A0A075B640 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7-6A0A075B640 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7-6A0A075B640 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav7-6A0A075B640 App-207ENSMUST00000227737 2827 ntBASIC10.9□□□□□ -0.67
Trav7-6A0A075B640 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms