Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Gm16198-201ENSMUST00000118766 670 ntBASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Gm14722-201ENSMUST00000118943 689 ntBASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Gm10154-201ENSMUST00000084445 354 ntBASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav8n-2A0A075B633 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Gm9385-201ENSMUST00000117563 472 ntBASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8n-2A0A075B633 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm22065-201ENSMUST00000103753 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm22066-201ENSMUST00000103761 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm24932-201ENSMUST00000103763 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm24115-201ENSMUST00000103799 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm22190-201ENSMUST00000103827 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm22191-201ENSMUST00000103831 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm24721-201ENSMUST00000103849 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm28018-201ENSMUST00000103869 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm26399-201ENSMUST00000103937 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm13216-201ENSMUST00000117145 591 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm25349-201ENSMUST00000177728 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm23616-201ENSMUST00000177797 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm25871-201ENSMUST00000177816 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm24752-201ENSMUST00000178240 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm24496-201ENSMUST00000178287 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm25649-201ENSMUST00000178476 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm25548-201ENSMUST00000178681 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm23147-201ENSMUST00000178841 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm26095-201ENSMUST00000179270 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm22171-201ENSMUST00000179283 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm23936-201ENSMUST00000179354 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm22619-201ENSMUST00000179516 110 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms