Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Grk6-207ENSMUST00000225925 2769 ntBASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 AA414768-201ENSMUST00000121924 1257 ntBASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9-1A0A075B601 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Gm6659-201ENSMUST00000174752 547 ntBASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9-1A0A075B601 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav9-1A0A075B601 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms