Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm14722-201ENSMUST00000118943 689 ntBASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm25406-201ENSMUST00000157599 105 ntBASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm22697-201ENSMUST00000175194 63 ntBASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm18101-201ENSMUST00000215769 548 ntBASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm12134-201ENSMUST00000122109 520 ntBASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms