Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Speer3W4VSP1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Speer3W4VSP1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Speer3W4VSP1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.84■□□□□ 0.13
Speer3W4VSP1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Speer3W4VSP1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Speer3W4VSP1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Speer3W4VSP1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.83■□□□□ 0.13
Speer3W4VSP1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Speer3W4VSP1 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.83■□□□□ 0.13
Speer3W4VSP1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Speer3W4VSP1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Mir770-201ENSMUST00000103252 94 ntBASIC15.83■□□□□ 0.12
Speer3W4VSP1 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.83■□□□□ 0.12
Speer3W4VSP1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Gm36991-201ENSMUST00000191800 648 ntBASIC15.83■□□□□ 0.12
Speer3W4VSP1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.83■□□□□ 0.12
Speer3W4VSP1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Speer3W4VSP1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Speer3W4VSP1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.82■□□□□ 0.12
Speer3W4VSP1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Gm10052-201ENSMUST00000168019 960 ntBASIC15.82■□□□□ 0.12
Speer3W4VSP1 Gm6659-201ENSMUST00000174752 547 ntBASIC15.82■□□□□ 0.12
Speer3W4VSP1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Gm7729-201ENSMUST00000050143 801 ntBASIC15.82■□□□□ 0.12
Speer3W4VSP1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.82■□□□□ 0.12
Speer3W4VSP1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.82■□□□□ 0.12
Speer3W4VSP1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Speer3W4VSP1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Speer3W4VSP1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Speer3W4VSP1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Speer3W4VSP1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.8■□□□□ 0.12
Speer3W4VSP1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Speer3W4VSP1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Speer3W4VSP1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms