Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.1□□□□□ -0.47
CcsQ9WU84 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.1□□□□□ -0.47
CcsQ9WU84 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.1□□□□□ -0.47
CcsQ9WU84 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CcsQ9WU84 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
CcsQ9WU84 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.09□□□□□ -0.47
CcsQ9WU84 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CcsQ9WU84 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CcsQ9WU84 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Gm16061-201ENSMUST00000122167 857 ntBASIC12.09□□□□□ -0.47
CcsQ9WU84 Gm17661-201ENSMUST00000170317 270 ntBASIC12.09□□□□□ -0.47
CcsQ9WU84 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
CcsQ9WU84 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.09□□□□□ -0.47
CcsQ9WU84 Gm7791-201ENSMUST00000219066 539 ntBASIC12.09□□□□□ -0.47
CcsQ9WU84 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.09□□□□□ -0.47
CcsQ9WU84 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CcsQ9WU84 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
CcsQ9WU84 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CcsQ9WU84 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CcsQ9WU84 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CcsQ9WU84 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.08□□□□□ -0.48
CcsQ9WU84 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms