Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Chchd1-203ENSMUST00000224633 557 ntBASIC15.53■□□□□ 0.08
Scn8aQ9WTU3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn8aQ9WTU3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn8aQ9WTU3 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Gm2756-201ENSMUST00000195851 400 ntBASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Scn8aQ9WTU3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Rpph1-201ENSMUST00000175096 319 ntBASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Gm27494-201ENSMUST00000184735 189 ntBASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Gm10154-201ENSMUST00000084445 354 ntBASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scn8aQ9WTU3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Gm23935-201ENSMUST00000102303 57 ntBASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Gm24270-201ENSMUST00000102326 57 ntBASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Gm24245-201ENSMUST00000157318 57 ntBASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Scn8aQ9WTU3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Gm11745-201ENSMUST00000121669 448 ntBASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Scn8aQ9WTU3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms