Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Gm10499-201ENSMUST00000174094 934 ntBASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tubd1Q9R1K7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Mir5131-201ENSMUST00000175426 93 ntBASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Gm4899-201ENSMUST00000178708 719 ntBASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Gm45167-201ENSMUST00000208007 322 ntBASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubd1Q9R1K7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Tubd1Q9R1K7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubd1Q9R1K7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Gm7787-201ENSMUST00000216858 688 ntBASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubd1Q9R1K7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubd1Q9R1K7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.68■□□□□ 0.1
Tubd1Q9R1K7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubd1Q9R1K7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms