Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Gm11780-201ENSMUST00000136880 516 ntBASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Gm19164-201ENSMUST00000210667 640 ntBASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom3Q9QXN0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Gm14822-201ENSMUST00000122247 291 ntBASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Gm8655-201ENSMUST00000221159 852 ntBASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom3Q9QXN0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom3Q9QXN0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom3Q9QXN0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom3Q9QXN0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Shroom3Q9QXN0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.51■□□□□ 0.07
Shroom3Q9QXN0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom3Q9QXN0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom3Q9QXN0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom3Q9QXN0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms