Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Gm11950-201ENSMUST00000121615 838 ntBASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Gm25016-201ENSMUST00000158399 131 ntBASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Gm23634-201ENSMUST00000175071 91 ntBASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccl28Q9JIL2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl28Q9JIL2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 AA414768-201ENSMUST00000121924 1257 ntBASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Gm6659-201ENSMUST00000174752 547 ntBASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Gm17808-201ENSMUST00000200859 894 ntBASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl28Q9JIL2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms