Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Gm18622-201ENSMUST00000219361 595 ntBASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup50Q9JIH2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Nup50Q9JIH2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Nup50Q9JIH2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Gm12497-201ENSMUST00000138778 237 ntBASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Gm19164-201ENSMUST00000210667 640 ntBASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup50Q9JIH2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Gm4459-201ENSMUST00000118750 468 ntBASIC16.38■□□□□ 0.21
Nup50Q9JIH2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Gm27867-201ENSMUST00000184778 125 ntBASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup50Q9JIH2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.37■□□□□ 0.21
Nup50Q9JIH2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms