Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Efs-202ENSMUST00000227037 2540 ntBASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4bQ9ES00 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Gm12085-201ENSMUST00000119263 940 ntBASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Gm38027-201ENSMUST00000192315 235 ntBASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Gm9731-201ENSMUST00000209480 747 ntBASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Timm23-208ENSMUST00000226683 750 ntBASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ube4bQ9ES00 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4bQ9ES00 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Gm22240-201ENSMUST00000175225 82 ntBASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ube4bQ9ES00 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms