Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Chchd1-203ENSMUST00000224633 557 ntBASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim54Q9ERP3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim54Q9ERP3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim54Q9ERP3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim54Q9ERP3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim54Q9ERP3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim54Q9ERP3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim54Q9ERP3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim54Q9ERP3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim54Q9ERP3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim54Q9ERP3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Trim54Q9ERP3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms