Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Gm11745-201ENSMUST00000121669 448 ntBASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Nrn1-204ENSMUST00000224323 1779 ntBASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf1Q9EPU4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 CT010506.4-201ENSMUST00000225457 351 ntBASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Gm5628-201ENSMUST00000222318 1049 ntBASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Cpsf1Q9EPU4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Gm13410-201ENSMUST00000117058 1415 ntBASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Gm13365-201ENSMUST00000121188 973 ntBASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf1Q9EPU4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Gm8242-201ENSMUST00000193029 1420 ntBASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Gm14701-201ENSMUST00000117156 348 ntBASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Gm16026-204ENSMUST00000162652 683 ntBASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf1Q9EPU4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Gm16011-201ENSMUST00000121567 2662 ntBASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 Gm37171-201ENSMUST00000192636 1185 ntBASIC21.18■□□□□ 0.98
Cpsf1Q9EPU4 CT030684.1-201ENSMUST00000227292 914 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms