Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd2Q9CZB3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd2Q9CZB3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd2Q9CZB3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Thumpd2Q9CZB3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Thumpd2Q9CZB3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.29■□□□□ 0.2
Thumpd2Q9CZB3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Gm25406-201ENSMUST00000157599 105 ntBASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Thumpd2Q9CZB3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Olfr129-201ENSMUST00000122318 993 ntBASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thumpd2Q9CZB3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Thumpd2Q9CZB3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Thumpd2Q9CZB3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Thumpd2Q9CZB3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Thumpd2Q9CZB3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd2Q9CZB3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.25■□□□□ 0.19
Thumpd2Q9CZB3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms