Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rpusd4Q9CWX4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Gm10052-201ENSMUST00000168019 960 ntBASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Gm7729-201ENSMUST00000050143 801 ntBASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Asic1-205ENSMUST00000228185 1818 ntBASIC13.16□□□□□ -0.3
Rpusd4Q9CWX4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpusd4Q9CWX4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Rpusd4Q9CWX4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpusd4Q9CWX4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpusd4Q9CWX4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpusd4Q9CWX4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms