Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Gm6443-201ENSMUST00000203599 874 ntBASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf135Q9CWS1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Mir8098-201ENSMUST00000184011 137 ntBASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Gm5864-201ENSMUST00000202263 970 ntBASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.16■□□□□ 0.18
Rnf135Q9CWS1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf135Q9CWS1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rnf135Q9CWS1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Gm13312-201ENSMUST00000119631 718 ntBASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Gm25406-201ENSMUST00000157599 105 ntBASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Gm27459-201ENSMUST00000184860 107 ntBASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Gm43347-201ENSMUST00000200226 580 ntBASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.14■□□□□ 0.17
Rnf135Q9CWS1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms