Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Gm12933-201ENSMUST00000120203 872 ntBASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Gm18666-201ENSMUST00000190039 958 ntBASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Gm43183-201ENSMUST00000200632 547 ntBASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Il3ra-202ENSMUST00000223589 738 ntBASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RTRAFQ9CQE8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
RTRAFQ9CQE8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTRAFQ9CQE8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms