Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Gm10566-201ENSMUST00000086739 996 ntBASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt88Q9CPR6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt88Q9CPR6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Krt88Q9CPR6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt88Q9CPR6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt88Q9CPR6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Krt88Q9CPR6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt88Q9CPR6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt88Q9CPR6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt88Q9CPR6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Gm6257-201ENSMUST00000163864 910 ntBASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt88Q9CPR6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms