Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.2■□□□□ 0.02
Trim16Q99PP9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.2■□□□□ 0.02
Trim16Q99PP9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Prob1-201ENSMUST00000097619 3021 ntBASIC15.2■□□□□ 0.02
Trim16Q99PP9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim16Q99PP9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.2■□□□□ 0.02
Trim16Q99PP9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim16Q99PP9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim16Q99PP9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Gm9103-201ENSMUST00000119371 405 ntBASIC15.18■□□□□ 0.02
Trim16Q99PP9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Rprl3-201ENSMUST00000157400 290 ntBASIC15.18■□□□□ 0.02
Trim16Q99PP9 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.18■□□□□ 0.02
Trim16Q99PP9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim16Q99PP9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim16Q99PP9 Gm28033-201ENSMUST00000184224 96 ntBASIC15.17■□□□□ 0.02
Trim16Q99PP9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms