Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Gm6266-201ENSMUST00000203844 806 ntBASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Gm3436-201ENSMUST00000179930 840 ntBASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Gm9522-201ENSMUST00000182394 926 ntBASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh15Q99PJ1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Gm15653-201ENSMUST00000119247 907 ntBASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Mir6420-201ENSMUST00000185032 102 ntBASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh15Q99PJ1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh15Q99PJ1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh15Q99PJ1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Pcdh15Q99PJ1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh15Q99PJ1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh15Q99PJ1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh15Q99PJ1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh15Q99PJ1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdh15Q99PJ1 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.33■□□□□ 0.37
Pcdh15Q99PJ1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh15Q99PJ1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms