Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Gm18827-201ENSMUST00000188341 790 ntBASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Gm18737-201ENSMUST00000173594 937 ntBASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Gm45331-201ENSMUST00000209868 554 ntBASIC15.67■□□□□ 0.1
Cdh23Q99PF4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh23Q99PF4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Mir3547-201ENSMUST00000175461 88 ntBASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Gm18018-201ENSMUST00000198273 408 ntBASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Gm43703-201ENSMUST00000200523 763 ntBASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Gm18049-201ENSMUST00000208909 581 ntBASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.66■□□□□ 0.1
Cdh23Q99PF4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh23Q99PF4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh23Q99PF4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh23Q99PF4 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.64■□□□□ 0.09
Cdh23Q99PF4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh23Q99PF4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cdh23Q99PF4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh23Q99PF4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh23Q99PF4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh23Q99PF4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms