Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.64■□□□□ 0.26
Tlr3Q99MB1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tlr3Q99MB1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Gm37935-201ENSMUST00000192012 982 ntBASIC16.64■□□□□ 0.25
Tlr3Q99MB1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tlr3Q99MB1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Asic1-205ENSMUST00000228185 1818 ntBASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tlr3Q99MB1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Gm14722-201ENSMUST00000118943 689 ntBASIC16.62■□□□□ 0.25
Tlr3Q99MB1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tlr3Q99MB1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Gm4535-201ENSMUST00000182274 558 ntBASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms