Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Gm6296-201ENSMUST00000222599 943 ntBASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha3Q91Y16 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha3Q91Y16 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdha3Q91Y16 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdha3Q91Y16 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Gm7862-201ENSMUST00000121461 292 ntBASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha3Q91Y16 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha3Q91Y16 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms