Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Gm11764-201ENSMUST00000120221 623 ntBASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Gm5682-201ENSMUST00000173402 505 ntBASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Gm37153-201ENSMUST00000193637 231 ntBASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha9Q91Y11 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Gm18489-201ENSMUST00000172565 551 ntBASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Gm8318-201ENSMUST00000182954 872 ntBASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 AV026068-213ENSMUST00000223675 1171 ntBASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha9Q91Y11 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha9Q91Y11 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms