Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Gm6443-201ENSMUST00000203599 874 ntBASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb2Q91Y00 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Gm12350-201ENSMUST00000121208 462 ntBASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Gm15590-201ENSMUST00000078419 552 ntBASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb2Q91Y00 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb2Q91Y00 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb2Q91Y00 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb2Q91Y00 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms